Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Vps33aQ9D2N9 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps33aQ9D2N9 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vps33aQ9D2N9 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps33aQ9D2N9 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps33aQ9D2N9 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm11222-201ENSMUST00000119005 738 ntBASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm7594-201ENSMUST00000218595 871 ntBASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vps33aQ9D2N9 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm15370-201ENSMUST00000117158 253 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm3096-201ENSMUST00000185770 364 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm19091-201ENSMUST00000208120 978 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm9899-201ENSMUST00000065519 555 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps33aQ9D2N9 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps33aQ9D2N9 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vps33aQ9D2N9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps33aQ9D2N9 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps33aQ9D2N9 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms