Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lrrc40Q9CRC8 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 B9d1os-201ENSMUST00000137010 674 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm16570-201ENSMUST00000161951 436 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Mir7070-201ENSMUST00000183657 86 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm7467-201ENSMUST00000185173 652 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Gm40414-201ENSMUST00000197608 481 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Id2-203ENSMUST00000222667 958 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrc40Q9CRC8 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.67
Lrrc40Q9CRC8 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lrrc40Q9CRC8 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Mir1893-201ENSMUST00000122565 83 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm23771-201ENSMUST00000178702 110 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm27910-201ENSMUST00000185004 107 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms