Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm6467-201ENSMUST00000171547 609 ntBASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm18538-201ENSMUST00000204265 484 ntBASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Aadacl4-201ENSMUST00000094510 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Lgals8-206ENSMUST00000135166 2416 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm7255-201ENSMUST00000187371 908 ntBASIC10.75□□□□□ -0.69
Cdh23Q99PF4 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Gm19566-201ENSMUST00000199576 610 ntBASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdh23Q99PF4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm14048-201ENSMUST00000121864 1268 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm7424-201ENSMUST00000206919 902 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm6682-201ENSMUST00000169666 1346 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm2981-201ENSMUST00000213947 694 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 AC118704.1-201ENSMUST00000225022 695 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Gm10250-201ENSMUST00000090488 482 ntBASIC10.74□□□□□ -0.69
Cdh23Q99PF4 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Cdh23Q99PF4 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms