Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm21778-201ENSMUST00000178779 471 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm8234-201ENSMUST00000198523 1107 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 CT025689.1-201ENSMUST00000225214 283 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm14071-201ENSMUST00000117817 509 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm14052-201ENSMUST00000121434 1031 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm13827-201ENSMUST00000148801 372 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm25569-201ENSMUST00000157175 131 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm9372-201ENSMUST00000168454 430 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm33707-201ENSMUST00000195135 569 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 AC134537.1-201ENSMUST00000219205 265 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm25580-201ENSMUST00000083409 327 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.63□□□□□ -0.87
Scrt1Q99M85 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Scrt1Q99M85 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm11475-201ENSMUST00000118482 476 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms