Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm8111-201ENSMUST00000117659 987 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm12463-201ENSMUST00000118271 849 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm14460-201ENSMUST00000121511 639 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Mir3547-201ENSMUST00000175461 88 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm23694-201ENSMUST00000179335 110 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm37284-201ENSMUST00000193607 539 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm43520-201ENSMUST00000197996 164 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm5051-201ENSMUST00000204085 485 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm44126-201ENSMUST00000204831 514 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.51□□□□□ -0.57
Usp11Q99K46 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm5468-202ENSMUST00000227851 682 ntBASIC11.51□□□□□ -0.57
Usp11Q99K46 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp11Q99K46 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm15617-201ENSMUST00000118973 771 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm21778-201ENSMUST00000178779 471 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.5□□□□□ -0.57
Usp11Q99K46 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.5□□□□□ -0.57
Usp11Q99K46 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp11Q99K46 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.5□□□□□ -0.57
Usp11Q99K46 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.5□□□□□ -0.57
Usp11Q99K46 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms