Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim29Q8R2Q0 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Gm12274-201ENSMUST00000120062 385 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Gm1848-201ENSMUST00000120711 789 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Gm28746-201ENSMUST00000187453 380 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Snora73b-201ENSMUST00000083419 205 ntBASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim29Q8R2Q0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Gm24398-201ENSMUST00000157870 109 ntBASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Mir7076-201ENSMUST00000183519 74 ntBASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim29Q8R2Q0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim29Q8R2Q0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms