Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm13117-201ENSMUST00000120894 691 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm16165-201ENSMUST00000160140 795 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm28388-201ENSMUST00000186262 437 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm8531-201ENSMUST00000188319 893 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm9369-201ENSMUST00000196009 733 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm18042-201ENSMUST00000219887 790 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm25554-201ENSMUST00000158075 113 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm8365-201ENSMUST00000197334 648 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm8285-201ENSMUST00000208293 759 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Clrn1Q8K445 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms