Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nhlrc3Q8CCH2 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm37835-201ENSMUST00000193305 361 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nhlrc3Q8CCH2 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Mir877-201ENSMUST00000104738 85 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm12419-201ENSMUST00000116649 636 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm15615-201ENSMUST00000118876 198 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms