Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm44690-201ENSMUST00000207984 382 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Olfr790-204ENSMUST00000218901 1070 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm5789-201ENSMUST00000222643 865 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Lect2-202ENSMUST00000225183 823 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 AC122290.1-201ENSMUST00000225631 1078 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 AC131100.1-201ENSMUST00000226328 470 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Snora73a-201ENSMUST00000082453 205 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm10268-201ENSMUST00000085340 555 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm13590-201ENSMUST00000120183 1588 ntBASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim35Q8C006 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm11433-201ENSMUST00000118318 228 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm17420-201ENSMUST00000164753 153 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm27468-201ENSMUST00000183577 106 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 AC154576.2-203ENSMUST00000224736 253 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Diaph3-206ENSMUST00000226745 713 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC12.71□□□□□ -0.37
Trim35Q8C006 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim35Q8C006 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim35Q8C006 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trim35Q8C006 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim35Q8C006 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim35Q8C006 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim35Q8C006 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim35Q8C006 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim35Q8C006 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim35Q8C006 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms