Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 AC132467.2-201ENSMUST00000226306 2253 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm22133-201ENSMUST00000102082 109 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm27516-201ENSMUST00000184237 98 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm38266-201ENSMUST00000194931 421 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm13097-201ENSMUST00000210722 397 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm45865-201ENSMUST00000211815 945 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm6991-201ENSMUST00000218475 1178 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.31□□□□□ -0.76
Rnf220Q6PDX6 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm37608-201ENSMUST00000195696 1880 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm15903-202ENSMUST00000199631 3518 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm13296-201ENSMUST00000117854 997 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm8343-201ENSMUST00000182705 994 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm28937-201ENSMUST00000185413 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm29400-201ENSMUST00000187208 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm28662-201ENSMUST00000188446 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm28251-201ENSMUST00000188835 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 AA914427-201ENSMUST00000193194 1166 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm37318-201ENSMUST00000194325 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm38017-201ENSMUST00000194768 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm37287-201ENSMUST00000195449 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm37793-201ENSMUST00000195548 695 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm6450-201ENSMUST00000200896 574 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm43966-201ENSMUST00000203301 612 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms