Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm6758-201ENSMUST00000119643 1055 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm16547-201ENSMUST00000159474 293 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm16165-201ENSMUST00000160140 795 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm7985-201ENSMUST00000183329 981 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.01□□□□□ -0.17
Clcn1Q64347 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Zmym2-202ENSMUST00000223669 1281 ntBASIC14.01□□□□□ -0.17
Clcn1Q64347 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clcn1Q64347 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn1Q64347 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14□□□□□ -0.17
Clcn1Q64347 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Gm23745-201ENSMUST00000104230 125 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clcn1Q64347 Gm26474-201ENSMUST00000116762 122 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Gm9166-201ENSMUST00000120293 561 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 Gm11942-201ENSMUST00000180255 345 ntBASIC14□□□□□ -0.17
Clcn1Q64347 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clcn1Q64347 Gm44146-201ENSMUST00000203508 816 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Gm7880-201ENSMUST00000203748 871 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Gm45258-201ENSMUST00000210042 853 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Gm45527-201ENSMUST00000211052 774 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Gm44740-201ENSMUST00000205603 1614 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Clcn1Q64347 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Gm44153-201ENSMUST00000204162 1580 ntBASIC14□□□□□ -0.17
Clcn1Q64347 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clcn1Q64347 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn1Q64347 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn1Q64347 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn1Q64347 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms