Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfaip3Q60769 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfaip3Q60769 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.35□□□□□ -0.75
Tnfaip3Q60769 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Mir6958-201ENSMUST00000184207 73 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Platr10-202ENSMUST00000191479 818 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm6439-201ENSMUST00000199849 862 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm18164-201ENSMUST00000213769 927 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm2594-201ENSMUST00000214774 742 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm18166-201ENSMUST00000215557 927 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.34□□□□□ -0.75
Tnfaip3Q60769 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Tnfaip3Q60769 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm14592-201ENSMUST00000117201 560 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm13351-201ENSMUST00000118087 414 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm24248-201ENSMUST00000157321 322 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm24074-201ENSMUST00000158178 260 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm17192-201ENSMUST00000169031 511 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfaip3Q60769 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms