Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm34379-201ENSMUST00000195036 290 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm4903-201ENSMUST00000210462 405 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm35713-201ENSMUST00000210516 199 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm44740-201ENSMUST00000205603 1614 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm21142-201ENSMUST00000179999 2604 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm18733-202ENSMUST00000174447 401 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm23647-201ENSMUST00000175042 109 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Rn5s-201ENSMUST00000177555 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s108-201ENSMUST00000177575 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s121-201ENSMUST00000177589 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s146-201ENSMUST00000177889 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm22109-201ENSMUST00000177995 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm22291-201ENSMUST00000178027 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s141-201ENSMUST00000178066 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm23284-201ENSMUST00000178069 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s100-201ENSMUST00000178106 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s111-201ENSMUST00000178203 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s105-201ENSMUST00000178499 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s149-201ENSMUST00000178520 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s103-201ENSMUST00000178755 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s123-201ENSMUST00000178804 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s142-201ENSMUST00000178820 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s144-201ENSMUST00000178859 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s139-201ENSMUST00000178975 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s134-201ENSMUST00000178983 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s136-201ENSMUST00000179080 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm25018-201ENSMUST00000179081 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s104-201ENSMUST00000179107 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s113-201ENSMUST00000179143 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s133-201ENSMUST00000179275 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s117-201ENSMUST00000179431 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm25212-201ENSMUST00000179432 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s138-201ENSMUST00000179476 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s122-201ENSMUST00000179500 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s143-201ENSMUST00000179542 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s107-201ENSMUST00000179704 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm26391-201ENSMUST00000179843 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s110-201ENSMUST00000179995 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s128-201ENSMUST00000180096 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 n-R5s124-201ENSMUST00000180334 119 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm18463-201ENSMUST00000207258 474 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm18460-201ENSMUST00000208088 464 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Gm24089-201ENSMUST00000093696 109 ntBASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps54Q5SPW0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms