Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm11996-201ENSMUST00000117538 915 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm4862-201ENSMUST00000170405 438 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm5870-201ENSMUST00000196461 282 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm40414-201ENSMUST00000197608 481 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm44251-201ENSMUST00000204963 442 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm18204-201ENSMUST00000209835 793 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rc3h1Q4VGL6 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm22937-201ENSMUST00000103954 131 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm13039-201ENSMUST00000118638 794 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm13981-201ENSMUST00000122360 447 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm25318-201ENSMUST00000122554 314 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm37604-201ENSMUST00000191749 1272 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm37852-201ENSMUST00000193027 350 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm19540-201ENSMUST00000221843 810 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm8325-201ENSMUST00000099086 453 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms