Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bbof1Q3V079 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.02□□□□□ -0.49
Bbof1Q3V079 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Bbof1Q3V079 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Bbof1Q3V079 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.01□□□□□ -0.49
Bbof1Q3V079 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm14665-201ENSMUST00000122294 557 ntBASIC12.01□□□□□ -0.49
Bbof1Q3V079 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm22138-201ENSMUST00000158748 128 ntBASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm42867-201ENSMUST00000202995 469 ntBASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.01□□□□□ -0.49
Bbof1Q3V079 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.01□□□□□ -0.49
Bbof1Q3V079 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Bbof1Q3V079 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm4900-201ENSMUST00000222046 1628 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm26013-201ENSMUST00000104404 119 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Gm14740-201ENSMUST00000118538 1150 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm21778-201ENSMUST00000178779 471 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm29787-201ENSMUST00000222129 849 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm13384-201ENSMUST00000117166 1344 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm43127-201ENSMUST00000195890 2789 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm18798-201ENSMUST00000187264 1700 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12□□□□□ -0.49
Bbof1Q3V079 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Bbof1Q3V079 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Bbof1Q3V079 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms