Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm5369-201ENSMUST00000217499 588 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm15528-201ENSMUST00000117821 864 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm13045-201ENSMUST00000119019 712 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm15595-201ENSMUST00000120840 961 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm24992-201ENSMUST00000157412 130 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm37284-201ENSMUST00000193607 539 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm44506-201ENSMUST00000206278 965 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm18165-201ENSMUST00000217426 928 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim43aQ3TL54 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm12165-201ENSMUST00000117047 342 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms