Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm11475-201ENSMUST00000118482 476 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm15617-201ENSMUST00000118973 771 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm3828-201ENSMUST00000121817 257 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm3329-201ENSMUST00000159873 556 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm37782-201ENSMUST00000194879 678 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.13□□□□□ -0.63
Ebf1Q07802 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm9791-201ENSMUST00000060997 447 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.13□□□□□ -0.63
Ebf1Q07802 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf1Q07802 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ebf1Q07802 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm13094-201ENSMUST00000117930 409 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm16459-201ENSMUST00000121443 686 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm26368-201ENSMUST00000157826 118 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm27956-201ENSMUST00000175604 260 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm11942-201ENSMUST00000180255 345 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm31274-201ENSMUST00000197356 229 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm10020-201ENSMUST00000081993 612 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Gm8420-201ENSMUST00000097103 598 ntBASIC11.12□□□□□ -0.63
Ebf1Q07802 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ebf1Q07802 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf1Q07802 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms