Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm43937-201ENSMUST00000204640 3122 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm23272-201ENSMUST00000104053 129 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm8302-201ENSMUST00000119217 852 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm4879-201ENSMUST00000122190 1272 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm20495-201ENSMUST00000173902 235 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm18367-201ENSMUST00000176139 600 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm8492-201ENSMUST00000182375 987 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm43520-201ENSMUST00000197996 164 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 AC122891.1-201ENSMUST00000218671 268 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm6722-201ENSMUST00000221586 390 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm19009-201ENSMUST00000223072 823 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm23680-201ENSMUST00000083162 164 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 n-R5s211-201ENSMUST00000093689 119 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm35850-202ENSMUST00000211705 2120 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.48□□□□□ -1.05
Cdx4Q07424 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Erich3-203ENSMUST00000189969 3460 ntBASIC8.48□□□□□ -1.05
Cdx4Q07424 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cdx4Q07424 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.48□□□□□ -1.05
Cdx4Q07424 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm25766-201ENSMUST00000104101 131 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Cdx4Q07424 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms