Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.14□□□□□ -0.95
Npas1P97459 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Npas1P97459 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.14□□□□□ -0.95
Npas1P97459 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Npas1P97459 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.14□□□□□ -0.95
Npas1P97459 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Npas1P97459 Gm42633-201ENSMUST00000198853 2764 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Gm37032-201ENSMUST00000194882 2975 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC9.13□□□□□ -0.95
Npas1P97459 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Npas1P97459 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Npas1P97459 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.13□□□□□ -0.95
Npas1P97459 Gm13392-201ENSMUST00000117708 150 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Gm11783-201ENSMUST00000119549 885 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.13□□□□□ -0.95
Npas1P97459 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.13□□□□□ -0.95
Npas1P97459 Gm17420-201ENSMUST00000164753 153 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
Npas1P97459 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Gm5745-201ENSMUST00000183748 313 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.13□□□□□ -0.95
Npas1P97459 AA914427-201ENSMUST00000193194 1166 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Gm9353-201ENSMUST00000200472 604 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.13□□□□□ -0.95
Npas1P97459 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.13□□□□□ -0.95
Npas1P97459 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.13□□□□□ -0.95
Npas1P97459 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Npas1P97459 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Npas1P97459 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Npas1P97459 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.13□□□□□ -0.95
Npas1P97459 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Npas1P97459 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Npas1P97459 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC9.12□□□□□ -0.95
Npas1P97459 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Npas1P97459 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms