Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm43969-201ENSMUST00000204833 535 ntBASIC12.02□□□□□ -0.49
Lig3P97386 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.02□□□□□ -0.49
Lig3P97386 Gm30671-201ENSMUST00000214898 318 ntBASIC12.02□□□□□ -0.49
Lig3P97386 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.02□□□□□ -0.49
Lig3P97386 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Lig3P97386 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lig3P97386 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lig3P97386 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Gm13445-201ENSMUST00000121664 307 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm12906-201ENSMUST00000154610 441 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm25677-201ENSMUST00000174983 72 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Gm9081-201ENSMUST00000182346 991 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.01□□□□□ -0.49
Lig3P97386 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.01□□□□□ -0.49
Lig3P97386 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm10263-201ENSMUST00000085163 300 ntBASIC12.01□□□□□ -0.49
Lig3P97386 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lig3P97386 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.01□□□□□ -0.49
Lig3P97386 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.01□□□□□ -0.49
Lig3P97386 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lig3P97386 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lig3P97386 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lig3P97386 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12□□□□□ -0.49
Lig3P97386 Gm21358-201ENSMUST00000191645 1659 ntBASIC12□□□□□ -0.49
Lig3P97386 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lig3P97386 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Lig3P97386 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lig3P97386 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lig3P97386 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lig3P97386 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lig3P97386 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12□□□□□ -0.49
Lig3P97386 Gm11996-201ENSMUST00000117538 915 ntBASIC12□□□□□ -0.49
Lig3P97386 Gm11700-201ENSMUST00000119409 403 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms