Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Gm6407-201ENSMUST00000176468 549 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Gm37028-201ENSMUST00000194276 107 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Gm9369-201ENSMUST00000196009 733 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Gm18561-201ENSMUST00000206027 804 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.45□□□□□ -0.9
Otx1P80205 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.45□□□□□ -0.9
Otx1P80205 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Otx1P80205 Gm23680-201ENSMUST00000083162 164 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.45□□□□□ -0.9
Otx1P80205 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Otx1P80205 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Otx1P80205 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.44□□□□□ -0.9
Otx1P80205 Gm12274-201ENSMUST00000120062 385 ntBASIC9.44□□□□□ -0.9
Otx1P80205 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Gm11952-201ENSMUST00000121172 821 ntBASIC9.44□□□□□ -0.9
Otx1P80205 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.44□□□□□ -0.9
Otx1P80205 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC9.44□□□□□ -0.9
Otx1P80205 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.44□□□□□ -0.9
Otx1P80205 Gm26134-201ENSMUST00000178484 110 ntBASIC9.44□□□□□ -0.9
Otx1P80205 Gm40414-201ENSMUST00000197608 481 ntBASIC9.44□□□□□ -0.9
Otx1P80205 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.44□□□□□ -0.9
Otx1P80205 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Gm39288-201ENSMUST00000210554 446 ntBASIC9.44□□□□□ -0.9
Otx1P80205 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.44□□□□□ -0.9
Otx1P80205 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.44□□□□□ -0.9
Otx1P80205 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Gm25580-201ENSMUST00000083409 327 ntBASIC9.44□□□□□ -0.9
Otx1P80205 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.44□□□□□ -0.9
Otx1P80205 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.44□□□□□ -0.9
Otx1P80205 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Otx1P80205 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Otx1P80205 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.43□□□□□ -0.9
Otx1P80205 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms