Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm3P62311 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.82□□□□□ -0.84
Lsm3P62311 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.82□□□□□ -0.84
Lsm3P62311 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lsm3P62311 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.82□□□□□ -0.84
Lsm3P62311 Gm15207-201ENSMUST00000119259 442 ntBASIC9.82□□□□□ -0.84
Lsm3P62311 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.82□□□□□ -0.84
Lsm3P62311 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.82□□□□□ -0.84
Lsm3P62311 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.82□□□□□ -0.84
Lsm3P62311 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm3P62311 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lsm3P62311 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm3P62311 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Lsm3P62311 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm7985-201ENSMUST00000183329 981 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.81□□□□□ -0.84
Lsm3P62311 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm25125-201ENSMUST00000083340 136 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Lsm3P62311 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.81□□□□□ -0.84
Lsm3P62311 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms