Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm7857-201ENSMUST00000117957 358 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm16166-201ENSMUST00000118291 787 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm23699-201ENSMUST00000158835 135 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm21092-201ENSMUST00000178995 955 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Mir7686-201ENSMUST00000200604 57 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gm45310-201ENSMUST00000210436 275 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.41□□□□□ -0.74
Cdkn2bP55271 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdkn2bP55271 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm13284-201ENSMUST00000121020 547 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm2383-201ENSMUST00000181461 807 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm6677-201ENSMUST00000195100 441 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Gm5186-201ENSMUST00000218781 920 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.4□□□□□ -0.74
Cdkn2bP55271 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cdkn2bP55271 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdkn2bP55271 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.39□□□□□ -0.75
Cdkn2bP55271 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cdkn2bP55271 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.39□□□□□ -0.75
Cdkn2bP55271 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.39□□□□□ -0.75
Cdkn2bP55271 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.39□□□□□ -0.75
Cdkn2bP55271 Gm11956-201ENSMUST00000119525 512 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms