Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ddx6P54823 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.13□□□□□ -0.63
Ddx6P54823 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Gm27316-201ENSMUST00000184884 277 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Gm8384-201ENSMUST00000190905 704 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Ddx6P54823 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ddx6P54823 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ddx6P54823 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ddx6P54823 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.13□□□□□ -0.63
Ddx6P54823 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.13□□□□□ -0.63
Ddx6P54823 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.13□□□□□ -0.63
Ddx6P54823 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ddx6P54823 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ddx6P54823 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ddx6P54823 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Gm23595-201ENSMUST00000104306 130 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Gm23769-201ENSMUST00000104441 121 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Ddx6P54823 Gm8019-201ENSMUST00000119317 587 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Gm13204-201ENSMUST00000120110 821 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Gm6425-201ENSMUST00000136332 790 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Gm13827-201ENSMUST00000148801 372 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.12□□□□□ -0.63
Ddx6P54823 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Gm42803-201ENSMUST00000201051 451 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.12□□□□□ -0.63
Ddx6P54823 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.12□□□□□ -0.63
Ddx6P54823 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ddx6P54823 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ddx6P54823 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.11□□□□□ -0.63
Ddx6P54823 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ddx6P54823 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.11□□□□□ -0.63
Ddx6P54823 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Ddx6P54823 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ddx6P54823 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms