Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.13□□□□□ -0.63
SftpbP50405 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SftpbP50405 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.13□□□□□ -0.63
SftpbP50405 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SftpbP50405 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Gm14395-201ENSMUST00000120494 563 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Gm25226-201ENSMUST00000158198 123 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.13□□□□□ -0.63
SftpbP50405 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.13□□□□□ -0.63
SftpbP50405 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Gm32111-201ENSMUST00000207689 846 ntBASIC11.13□□□□□ -0.63
SftpbP50405 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.13□□□□□ -0.63
SftpbP50405 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SftpbP50405 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SftpbP50405 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SftpbP50405 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SftpbP50405 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.12□□□□□ -0.63
SftpbP50405 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SftpbP50405 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.12□□□□□ -0.63
SftpbP50405 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Gm23272-201ENSMUST00000104053 129 ntBASIC11.12□□□□□ -0.63
SftpbP50405 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.12□□□□□ -0.63
SftpbP50405 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.12□□□□□ -0.63
SftpbP50405 Gm43438-201ENSMUST00000198133 379 ntBASIC11.12□□□□□ -0.63
SftpbP50405 Gm44323-201ENSMUST00000198689 129 ntBASIC11.12□□□□□ -0.63
SftpbP50405 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.12□□□□□ -0.63
SftpbP50405 Gm43916-201ENSMUST00000205062 967 ntBASIC11.12□□□□□ -0.63
SftpbP50405 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SftpbP50405 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SftpbP50405 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SftpbP50405 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.12□□□□□ -0.63
SftpbP50405 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SftpbP50405 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SftpbP50405 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
SftpbP50405 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
SftpbP50405 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SftpbP50405 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.11□□□□□ -0.63
SftpbP50405 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.11□□□□□ -0.63
SftpbP50405 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SftpbP50405 Gm23061-201ENSMUST00000102348 116 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm9133-201ENSMUST00000118289 540 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm13422-201ENSMUST00000118834 504 ntBASIC11.11□□□□□ -0.63
SftpbP50405 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.11□□□□□ -0.63
SftpbP50405 Gm4726-201ENSMUST00000135604 736 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SftpbP50405 Gm6019-201ENSMUST00000148369 736 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SftpbP50405 Gm19353-201ENSMUST00000184561 445 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.11□□□□□ -0.63
SftpbP50405 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.11□□□□□ -0.63
SftpbP50405 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.11□□□□□ -0.63
SftpbP50405 Gm37905-201ENSMUST00000195310 341 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Gm18056-201ENSMUST00000207670 568 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm18061-201ENSMUST00000208350 562 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm18063-201ENSMUST00000208529 568 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm18052-201ENSMUST00000208750 559 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms