Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm19918-201ENSMUST00000194858 400 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm29763-201ENSMUST00000205306 616 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-6P43688 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.37□□□□□ -0.75
Nkx2-6P43688 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.36□□□□□ -0.75
Nkx2-6P43688 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm11993-201ENSMUST00000121861 820 ntBASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Mir8091-201ENSMUST00000183602 139 ntBASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm5700-201ENSMUST00000191483 989 ntBASIC10.36□□□□□ -0.75
Nkx2-6P43688 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.36□□□□□ -0.75
Nkx2-6P43688 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.36□□□□□ -0.75
Nkx2-6P43688 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-6P43688 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms