Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm27833-201ENSMUST00000184285 124 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 Gm8226-201ENSMUST00000190511 798 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 Gm6677-201ENSMUST00000195100 441 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdx2P43241 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.4□□□□□ -0.74
Cdx2P43241 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.4□□□□□ -0.74
Cdx2P43241 Gm8162-201ENSMUST00000213951 665 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cdx2P43241 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cdx2P43241 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.4□□□□□ -0.74
Cdx2P43241 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cdx2P43241 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx2P43241 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.4□□□□□ -0.75
Cdx2P43241 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Cdx2P43241 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Cdx2P43241 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx2P43241 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cdx2P43241 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm12463-201ENSMUST00000118271 849 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.39□□□□□ -0.75
Cdx2P43241 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.39□□□□□ -0.75
Cdx2P43241 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Gm29808-201ENSMUST00000194419 468 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Gm43726-201ENSMUST00000199110 775 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Gm42803-201ENSMUST00000201051 451 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.39□□□□□ -0.75
Cdx2P43241 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx2P43241 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx2P43241 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms