Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.95□□□□□ -0.98
VhlP40338 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm12501-201ENSMUST00000119163 529 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm13461-201ENSMUST00000120980 662 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm11244-201ENSMUST00000121243 237 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm8199-201ENSMUST00000121323 823 ntBASIC8.95□□□□□ -0.98
VhlP40338 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Gm23694-201ENSMUST00000179335 110 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
VhlP40338 Platr10-202ENSMUST00000191479 818 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm43186-201ENSMUST00000198130 824 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm5865-201ENSMUST00000198713 637 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm43068-201ENSMUST00000201095 1273 ntBASIC8.95□□□□□ -0.98
VhlP40338 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 AC107638.1-201ENSMUST00000213690 1061 ntBASIC8.95□□□□□ -0.98
VhlP40338 AC159747.1-201ENSMUST00000219903 265 ntBASIC8.95□□□□□ -0.98
VhlP40338 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC8.95□□□□□ -0.98
VhlP40338 CT009546.1-201ENSMUST00000222573 1120 ntBASIC8.95□□□□□ -0.98
VhlP40338 CT573047.1-201ENSMUST00000223652 851 ntBASIC8.95□□□□□ -0.98
VhlP40338 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Gm21811-201ENSMUST00000096485 930 ntBASIC8.95□□□□□ -0.98
VhlP40338 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
VhlP40338 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
VhlP40338 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC8.95□□□□□ -0.98
VhlP40338 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.95□□□□□ -0.98
VhlP40338 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VhlP40338 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 AC121870.2-201ENSMUST00000214343 1870 ntBASIC8.94□□□□□ -0.98
VhlP40338 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
VhlP40338 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC8.94□□□□□ -0.98
VhlP40338 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Gm4917-201ENSMUST00000121452 650 ntBASIC8.94□□□□□ -0.98
VhlP40338 Gm9089-201ENSMUST00000122027 526 ntBASIC8.94□□□□□ -0.98
VhlP40338 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.94□□□□□ -0.98
VhlP40338 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VhlP40338 Gm37466-201ENSMUST00000195692 652 ntBASIC8.94□□□□□ -0.98
VhlP40338 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC8.94□□□□□ -0.98
VhlP40338 Gm45310-201ENSMUST00000210436 275 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms