Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P20040 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.72□□□□□ -0.85
P20040 Gm5451-201ENSMUST00000080545 579 ntBASIC9.72□□□□□ -0.85
P20040 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.72□□□□□ -0.85
P20040 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.72□□□□□ -0.85
P20040 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.72□□□□□ -0.85
P20040 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P20040 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.72□□□□□ -0.85
P20040 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.72□□□□□ -0.85
P20040 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.72□□□□□ -0.85
P20040 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
P20040 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.71□□□□□ -0.85
P20040 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
P20040 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
P20040 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
P20040 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P20040 Nln-205ENSMUST00000224945 2486 ntBASIC9.71□□□□□ -0.85
P20040 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.71□□□□□ -0.85
P20040 Gm15615-201ENSMUST00000118876 198 ntBASIC9.71□□□□□ -0.86
P20040 Gm13888-201ENSMUST00000119148 422 ntBASIC9.71□□□□□ -0.86
P20040 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.71□□□□□ -0.86
P20040 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.71□□□□□ -0.86
P20040 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.71□□□□□ -0.86
P20040 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P20040 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.71□□□□□ -0.86
P20040 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P20040 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Gm23771-201ENSMUST00000178702 110 ntBASIC9.71□□□□□ -0.86
P20040 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Gm27910-201ENSMUST00000185004 107 ntBASIC9.71□□□□□ -0.86
P20040 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
P20040 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.71□□□□□ -0.86
P20040 Gm5996-201ENSMUST00000211110 718 ntBASIC9.71□□□□□ -0.86
P20040 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.71□□□□□ -0.86
P20040 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.71□□□□□ -0.86
P20040 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P20040 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
P20040 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.71□□□□□ -0.86
P20040 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.71□□□□□ -0.86
P20040 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P20040 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.71□□□□□ -0.86
P20040 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.71□□□□□ -0.86
P20040 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P20040 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P20040 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P20040 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
P20040 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms