Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm37975-201ENSMUST00000195494 2099 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Gm11989-201ENSMUST00000117240 672 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Gm11362-201ENSMUST00000118838 850 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Mir1896-201ENSMUST00000122641 81 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC8.86□□□□□ -0.99
Cdx1P18111 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC8.86□□□□□ -0.99
Cdx1P18111 Mir7677-201ENSMUST00000184226 67 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Gm7467-201ENSMUST00000185173 652 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC8.86□□□□□ -0.99
Cdx1P18111 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC8.86□□□□□ -0.99
Cdx1P18111 Gm44958-201ENSMUST00000203734 736 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Lect2-202ENSMUST00000225183 823 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Gm45769-201ENSMUST00000204588 1828 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Cdx1P18111 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 CT025645.2-201ENSMUST00000223278 3827 ntBASIC8.86□□□□□ -0.99
Cdx1P18111 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cdx1P18111 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cdx1P18111 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Adgrv1-214ENSMUST00000224088 1492 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Cdx1P18111 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Cdx1P18111 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm24934-201ENSMUST00000103764 111 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Gm11941-201ENSMUST00000119904 610 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Gm11573-201ENSMUST00000119956 394 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC8.85□□□□□ -0.99
Cdx1P18111 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Ighv4-2-201ENSMUST00000192975 362 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 AC159819.2-201ENSMUST00000216151 342 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Gm19994-201ENSMUST00000217086 586 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms