Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm13047-201ENSMUST00000117116 815 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm11957-201ENSMUST00000118304 779 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm37852-201ENSMUST00000193027 350 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm42433-201ENSMUST00000196806 940 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm43506-201ENSMUST00000200675 753 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.19□□□□□ -0.62
Rc3h2P0C090 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rc3h2P0C090 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm33080-201ENSMUST00000205429 172 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms