Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxb3P09026 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 Gm6518-201ENSMUST00000208450 342 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 Gm7684-201ENSMUST00000211891 829 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxb3P09026 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Hoxb3P09026 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxb3P09026 AC132384.4-201ENSMUST00000220343 1397 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.25□□□□□ -0.61
Hoxb3P09026 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxb3P09026 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxb3P09026 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm25148-201ENSMUST00000104611 123 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm16329-201ENSMUST00000148174 371 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm23694-201ENSMUST00000179335 110 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm37560-201ENSMUST00000194289 1000 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm43106-201ENSMUST00000199485 637 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm19572-201ENSMUST00000214326 338 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm5449-201ENSMUST00000081132 357 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.24□□□□□ -0.61
Hoxb3P09026 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxb3P09026 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.24□□□□□ -0.61
Hoxb3P09026 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm8111-201ENSMUST00000117659 987 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm16219-201ENSMUST00000120096 274 ntBASIC11.23□□□□□ -0.61
Hoxb3P09026 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxb3P09026 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxb3P09026 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms