Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Igh-VJ558P01758 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm16518-201ENSMUST00000117960 508 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm22138-201ENSMUST00000158748 128 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm26134-201ENSMUST00000178484 110 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm42997-202ENSMUST00000200321 985 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm7880-201ENSMUST00000203748 871 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Igh-VJ558P01758 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm11451-201ENSMUST00000118946 630 ntBASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm12791-201ENSMUST00000120788 655 ntBASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm19459-201ENSMUST00000176240 835 ntBASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm8531-201ENSMUST00000188319 893 ntBASIC9.4□□□□□ -0.9
Igh-VJ558P01758 Gm18827-201ENSMUST00000188341 790 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms