Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.21□□□□□ -0.61
CopeO89079 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.21□□□□□ -0.61
CopeO89079 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.21□□□□□ -0.61
CopeO89079 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Platr10-202ENSMUST00000191479 818 ntBASIC11.21□□□□□ -0.61
CopeO89079 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
CopeO89079 Gm18042-201ENSMUST00000219887 790 ntBASIC11.21□□□□□ -0.61
CopeO89079 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.21□□□□□ -0.61
CopeO89079 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CopeO89079 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CopeO89079 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
CopeO89079 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.21□□□□□ -0.62
CopeO89079 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CopeO89079 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
CopeO89079 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CopeO89079 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
CopeO89079 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.2□□□□□ -0.62
CopeO89079 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.2□□□□□ -0.62
CopeO89079 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.2□□□□□ -0.62
CopeO89079 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.2□□□□□ -0.62
CopeO89079 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.2□□□□□ -0.62
CopeO89079 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CopeO89079 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.2□□□□□ -0.62
CopeO89079 Gm27552-201ENSMUST00000183351 62 ntBASIC11.2□□□□□ -0.62
CopeO89079 Gm27844-201ENSMUST00000183613 62 ntBASIC11.2□□□□□ -0.62
CopeO89079 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.2□□□□□ -0.62
CopeO89079 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
CopeO89079 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.2□□□□□ -0.62
CopeO89079 Gm5468-202ENSMUST00000227851 682 ntBASIC11.2□□□□□ -0.62
CopeO89079 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.2□□□□□ -0.62
CopeO89079 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.2□□□□□ -0.62
CopeO89079 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.2□□□□□ -0.62
CopeO89079 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CopeO89079 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CopeO89079 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.19□□□□□ -0.62
CopeO89079 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.19□□□□□ -0.62
CopeO89079 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms