Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
B020004C17RikJ3QP07 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm20091-201ENSMUST00000179683 189 ntBASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm17799-201ENSMUST00000183270 667 ntBASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gm38233-201ENSMUST00000194259 807 ntBASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
B020004C17RikJ3QP07 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm44388-201ENSMUST00000204350 258 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm2716-201ENSMUST00000212350 643 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm5040-201ENSMUST00000218609 800 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm8615-201ENSMUST00000025307 771 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
B020004C17RikJ3QP07 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
B020004C17RikJ3QP07 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 248.3 ms