Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.24□□□□□ -0.29
NpcdF8VQB8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.24□□□□□ -0.29
NpcdF8VQB8 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm11380-201ENSMUST00000118067 560 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm45258-201ENSMUST00000210042 853 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 AC164429.1-201ENSMUST00000224210 518 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.23□□□□□ -0.29
NpcdF8VQB8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NpcdF8VQB8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm14571-201ENSMUST00000118292 570 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm11700-201ENSMUST00000119409 403 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm13505-201ENSMUST00000121666 817 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm16288-201ENSMUST00000137940 367 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm7833-201ENSMUST00000183288 990 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Mir8111-201ENSMUST00000184463 137 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm5291-201ENSMUST00000201965 899 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm5040-201ENSMUST00000218609 800 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.22□□□□□ -0.29
NpcdF8VQB8 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms