Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm14997-201ENSMUST00000119232 636 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gm6500-201ENSMUST00000119412 451 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gm14231-201ENSMUST00000120090 592 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gm14176-201ENSMUST00000121302 477 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gm13688-201ENSMUST00000121557 608 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Scn11aQ9R053 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.79□□□□□ -0.36
Scn11aQ9R053 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn11aQ9R053 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gm42908-201ENSMUST00000197508 870 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn11aQ9R053 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scn11aQ9R053 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.79□□□□□ -0.36
Scn11aQ9R053 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Scn11aQ9R053 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn11aQ9R053 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn11aQ9R053 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.78□□□□□ -0.36
Scn11aQ9R053 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm13792-201ENSMUST00000121350 423 ntBASIC12.78□□□□□ -0.36
Scn11aQ9R053 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm25591-201ENSMUST00000177317 94 ntBASIC12.78□□□□□ -0.36
Scn11aQ9R053 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm6859-201ENSMUST00000218614 989 ntBASIC12.78□□□□□ -0.36
Scn11aQ9R053 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn11aQ9R053 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Scn11aQ9R053 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Gm22662-201ENSMUST00000175290 256 ntBASIC12.77□□□□□ -0.36
Scn11aQ9R053 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.77□□□□□ -0.36
Scn11aQ9R053 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.77□□□□□ -0.36
Scn11aQ9R053 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Scn11aQ9R053 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.77□□□□□ -0.37
Scn11aQ9R053 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.77□□□□□ -0.37
Scn11aQ9R053 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.77□□□□□ -0.37
Scn11aQ9R053 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn11aQ9R053 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn11aQ9R053 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm23081-201ENSMUST00000157845 297 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm28391-201ENSMUST00000185202 379 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm29528-201ENSMUST00000186699 379 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm29526-201ENSMUST00000187217 379 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm5311-201ENSMUST00000203518 709 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm5738-201ENSMUST00000206016 779 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn11aQ9R053 Gm6426-201ENSMUST00000209048 854 ntBASIC12.76□□□□□ -0.37
Scn11aQ9R053 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn11aQ9R053 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms