Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC13.8□□□□□ -0.2
Chmp4bQ9D8B3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Gm12663-201ENSMUST00000118481 958 ntBASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Gm37852-201ENSMUST00000193027 350 ntBASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Gm9463-201ENSMUST00000206707 601 ntBASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4bQ9D8B3 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm43999-201ENSMUST00000204286 2889 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm25554-201ENSMUST00000158075 113 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm9550-201ENSMUST00000161130 862 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm8959-201ENSMUST00000213150 571 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Chmp4bQ9D8B3 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC13.77□□□□□ -0.2
Chmp4bQ9D8B3 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4bQ9D8B3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4bQ9D8B3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4bQ9D8B3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Chmp4bQ9D8B3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4bQ9D8B3 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms