Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm15528-201ENSMUST00000117821 864 ntBASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm37284-201ENSMUST00000193607 539 ntBASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm42867-201ENSMUST00000202995 469 ntBASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp4cQ9D7F7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gm14592-201ENSMUST00000117201 560 ntBASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gm19246-201ENSMUST00000173599 255 ntBASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp4cQ9D7F7 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm43112-201ENSMUST00000196665 3122 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm23272-201ENSMUST00000104053 129 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm9062-201ENSMUST00000117712 727 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm44323-201ENSMUST00000198689 129 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Gm42141-201ENSMUST00000196534 2172 ntBASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp4cQ9D7F7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.03□□□□□ -0.32
Chmp4cQ9D7F7 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms