Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm25148-201ENSMUST00000104611 123 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm14395-201ENSMUST00000120494 563 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Olfml3-204ENSMUST00000169286 874 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm45550-201ENSMUST00000209380 946 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Snora73b-201ENSMUST00000083419 205 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp11Q99K46 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp11Q99K46 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Usp11Q99K46 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp11Q99K46 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp11Q99K46 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.52□□□□□ -0.56
Usp11Q99K46 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp11Q99K46 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Usp11Q99K46 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Usp11Q99K46 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp11Q99K46 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Usp11Q99K46 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.52□□□□□ -0.57
Usp11Q99K46 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm25492-201ENSMUST00000157383 129 ntBASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm3508-201ENSMUST00000186012 792 ntBASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.52□□□□□ -0.57
Usp11Q99K46 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp11Q99K46 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.52□□□□□ -0.57
Usp11Q99K46 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Usp11Q99K46 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp11Q99K46 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms