Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm23272-201ENSMUST00000104053 129 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm9062-201ENSMUST00000117712 727 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm13611-201ENSMUST00000118269 318 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm7467-201ENSMUST00000185173 652 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm40414-201ENSMUST00000197608 481 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm18042-201ENSMUST00000219887 790 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Spcs1-203ENSMUST00000226374 592 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.98□□□□□ -0.81
Lims1Q99JW4 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Lims1Q99JW4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm9133-201ENSMUST00000118289 540 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm22144-201ENSMUST00000157402 102 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm44323-201ENSMUST00000198689 129 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm44315-201ENSMUST00000203041 219 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm45398-201ENSMUST00000210561 165 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.97□□□□□ -0.81
Lims1Q99JW4 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lims1Q99JW4 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.96□□□□□ -0.81
Lims1Q99JW4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms