Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd2Q99JR8 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm23439-201ENSMUST00000104292 132 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm24140-201ENSMUST00000122773 326 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm24074-201ENSMUST00000158178 260 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm24943-201ENSMUST00000158329 433 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm42803-201ENSMUST00000201051 451 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm44420-201ENSMUST00000203669 490 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm45893-201ENSMUST00000211899 247 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd2Q99JR8 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm13688-201ENSMUST00000121557 608 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm37688-201ENSMUST00000195195 465 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm8643-201ENSMUST00000195228 625 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm3527-201ENSMUST00000198905 460 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms