Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm10731-201ENSMUST00000181171 448 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Mir6979-201ENSMUST00000183927 56 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm29107-201ENSMUST00000190910 347 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm9645-201ENSMUST00000197131 792 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm9132-201ENSMUST00000210182 832 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Gm25125-201ENSMUST00000083340 136 ntBASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhb13Q91Y06 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm4732-201ENSMUST00000118778 473 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm14603-201ENSMUST00000121275 448 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm25109-201ENSMUST00000122474 114 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm28925-201ENSMUST00000188586 168 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm44100-201ENSMUST00000204329 436 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhb13Q91Y06 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhb13Q91Y06 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhb13Q91Y06 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhb13Q91Y06 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms