Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm7238-201ENSMUST00000206467 973 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm6564-201ENSMUST00000075377 619 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm6478-201ENSMUST00000099450 742 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm13171-201ENSMUST00000117233 391 ntBASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm25569-201ENSMUST00000157175 131 ntBASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm7765-201ENSMUST00000182585 974 ntBASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Gm7525-201ENSMUST00000219425 454 ntBASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdhga6Q91XY2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm15707-201ENSMUST00000118804 996 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm24078-201ENSMUST00000158184 103 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm42751-201ENSMUST00000198065 559 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms