Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.39□□□□□ -0.75
Csnka2ipQ8CH19 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Mir453-201ENSMUST00000104732 82 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm12663-201ENSMUST00000118481 958 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm24248-201ENSMUST00000157321 322 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Snord55-201ENSMUST00000174939 79 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm26976-201ENSMUST00000182929 908 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm28833-201ENSMUST00000189671 559 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm42867-201ENSMUST00000202995 469 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm44814-201ENSMUST00000207018 434 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm9102-201ENSMUST00000219250 465 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csnka2ipQ8CH19 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Csnka2ipQ8CH19 Gm37365-201ENSMUST00000193109 409 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms