Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc17Q8CE13 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm24279-201ENSMUST00000104236 131 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm13204-201ENSMUST00000120110 821 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm15136-201ENSMUST00000120552 533 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm13284-201ENSMUST00000121020 547 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm12906-201ENSMUST00000154610 441 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm43854-201ENSMUST00000200418 394 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm45527-201ENSMUST00000211052 774 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Id2-203ENSMUST00000222667 958 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc17Q8CE13 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Mir181d-201ENSMUST00000102383 72 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm22937-201ENSMUST00000103954 131 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Snord23-201ENSMUST00000116828 109 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm6630-201ENSMUST00000119199 454 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm25226-201ENSMUST00000158198 123 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Olfml3-204ENSMUST00000169286 874 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm24328-201ENSMUST00000175104 67 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm26119-201ENSMUST00000175601 104 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Gm30946-201ENSMUST00000198288 724 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.44□□□□□ -0.58
Ccdc17Q8CE13 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms