Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Gm42851-201ENSMUST00000201325 1411 ntBASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trim52Q8CDV4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm37688-201ENSMUST00000195195 465 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm42689-201ENSMUST00000202403 404 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 AC116797.2-202ENSMUST00000223587 1017 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 CT025603.1-201ENSMUST00000224040 448 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 AC141884.2-201ENSMUST00000228811 775 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim52Q8CDV4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Mir6953-201ENSMUST00000184745 68 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gm27441-201ENSMUST00000185000 105 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gm5543-201ENSMUST00000193329 1091 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 CT030035.1-201ENSMUST00000223964 935 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Gm5278-201ENSMUST00000055957 552 ntBASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim52Q8CDV4 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms