Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pabpn1Q8CCS6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm24471-201ENSMUST00000104485 131 ntBASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm9434-201ENSMUST00000118975 813 ntBASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm14856-201ENSMUST00000121548 613 ntBASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm29372-201ENSMUST00000191416 364 ntBASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Gm43102-201ENSMUST00000201004 2324 ntBASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pabpn1Q8CCS6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm25842-201ENSMUST00000122590 322 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm28032-201ENSMUST00000184104 96 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm29725-201ENSMUST00000206614 407 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 AC154669.1-201ENSMUST00000224405 482 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 AC154687.1-201ENSMUST00000224875 677 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm26397-201ENSMUST00000083703 134 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm37886-201ENSMUST00000195349 1513 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gm42521-201ENSMUST00000199190 2040 ntBASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1Q8CCS6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm12619-201ENSMUST00000117369 385 ntBASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm11225-201ENSMUST00000118903 1049 ntBASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm14182-201ENSMUST00000119334 210 ntBASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1Q8CCS6 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms