Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lysmd4Q8CC84 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lysmd4Q8CC84 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm16219-201ENSMUST00000120096 274 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm15566-201ENSMUST00000121130 590 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm37852-201ENSMUST00000193027 350 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm37284-201ENSMUST00000193607 539 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm43186-201ENSMUST00000198130 824 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.77□□□□□ -0.85
Lysmd4Q8CC84 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm12266-201ENSMUST00000120311 962 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm44551-201ENSMUST00000208804 171 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm45310-201ENSMUST00000210436 275 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.76□□□□□ -0.85
Lysmd4Q8CC84 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.75□□□□□ -0.85
Lysmd4Q8CC84 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.75□□□□□ -0.85
Lysmd4Q8CC84 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lysmd4Q8CC84 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 351.7 ms