Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Tsen54Q8C2A2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm12380-201ENSMUST00000119012 544 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm16570-201ENSMUST00000161951 436 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm17040-202ENSMUST00000170597 889 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm16505-201ENSMUST00000179981 232 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm28450-201ENSMUST00000187349 638 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm38321-201ENSMUST00000195053 235 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Rps4l-202ENSMUST00000204242 789 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Tsen54Q8C2A2 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Tsen54Q8C2A2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm7857-201ENSMUST00000117957 358 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm37466-201ENSMUST00000195692 652 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms